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Human Chromosome 7 Mapping and Sequencing

Genome Technology Branch

DIR Projects



 

A Physical Map of Human Chromosome 7:
An Integrated YAC Contig Map with
Average STS Spacing of 79 kb


Title Page

Abstract

Introduction

Results

 Overview of Project
 Mapping Reagents
 Integration with Genetic, RH, and Cytogenetic Maps
 General Features of Assembled YAC Contigs and STS Maps
 Unanchored Contigs
 Gaps on Contig Map
 Apparent False-Negative and False-Positive Data
 Complex Chromosomal Regions
 Indices of Map Completion
 Relationship Between Genetic and Physical Distance
 Data Dissemination

Discussion

Methods

  STS Order
  Theoretical Considerations
 
  • Comparison to Other Chromosome 7 Physical Maps
  •  
  • Comparison to Physical Maps of Other Human Chromosomes
  •  
  • Problems Encountered
  •  
  • Utility of Map
  •  Chromosome 7 STSs
     YAC Clones
     Strategy for Map Construction

    Acknowledgements

    Tables

      Table 1 YAC Contigs Constituting the Human Chromosome 7 Physical Map
      Table 2 World Wide Web Sites Containing Chromosome 7 Mapping Data
      Table 3Characteristics of Different Sources of Mapped Chromosome 7 STSs
      Table 4Characteristics of Different Sources of Mapped Chromosome 7 YACs

    Figures

      Figure 1 Distribution of STSs on the chromosome 7 YAC contig map, Genethon genetic map, and/or RH map.
      Figure 2 Physical location of markers on the chromosome 7 Genethon genetic map.
      Figure 3 Physical location of markers on the chromosome 7 RH map.
      Figure 4 Representative YAC contig map.
      Figure 5 Order of STSs in YAC contig maps.
      Figure 6 Global positions of the anchored YAC contigs.
      Figure 7 Relative resolution of mapped chromosome 7 STSs.
      Figure 8 Relationship between genetic and physical distance across the length of human chromosome 7.

    References




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